Search results

Whole genome or at least whole chromosome visualisation

Status: Open.

#496 In vgteam/sequenceTubeMap;

· Bio-finder opened on Apr 23, 2026

Sequence Tube Map shows spiral/loop-like alignments on a circular, highly connected vg graph, but BLAST/linear inspection looks colinear

Status: Open.

#495 In vgteam/sequenceTubeMap;

· florenmartino opened on Feb 11, 2026

GAM file is too big to visualize

Status: Open.

#494 In vgteam/sequenceTubeMap;

· lizakulaeva opened on Jan 19, 2026

Unexpected token 'I', "Internal S"... is not valid JSON

Status: Open.

#493 In vgteam/sequenceTubeMap;

· guo23e opened on Sep 8, 2025

vg chunk failed: error[vg chunk]: input path not found in xg index

Status: Open.

#492 In vgteam/sequenceTubeMap;

· SimonaSecomandi opened on Aug 20, 2025

GLIBC version incompatibility

Status: Open.

#491 In vgteam/sequenceTubeMap;

· guo23e opened on Aug 18, 2025

BED files should be interpreted as 0-based end-exclusive

Status: Open.

#488 In vgteam/sequenceTubeMap;

· WallBPG opened on Aug 14, 2025

Add legend for insertions/edits/deletions

Status: Open.

#483 In vgteam/sequenceTubeMap;

· adamnovak opened on Jun 12, 2025

Synthetic Data Examples

Status: Open.

#478 In vgteam/sequenceTubeMap;

· mcbbaker opened on Apr 9, 2025

Hosting SequenceTubeMap for Public Access

Status: Open.

#477 In vgteam/sequenceTubeMap;

· syresbr opened on Apr 1, 2025

Contain/restrict memory usage for vg commands, per-job and in total

Status: Open.

#474 In vgteam/sequenceTubeMap;

· adamnovak opened on Feb 11, 2025

Created a fork for a structural variant view and other additions

Status: Open.

#465 In vgteam/sequenceTubeMap;

· JasperGeelen opened on Jan 1, 2025