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perf: try out new cliping numba kernel #3952

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ilan-gold wants to merge 9 commits into
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+77 −35

fix: maybe?

8b3f328
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perf: try out new cliping numba kernel #3952

fix: maybe?
8b3f328
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Codecov / codecov/project succeeded Jan 30, 2026 in 0s

78.35% (target 75.00%)

View this Pull Request on Codecov

78.35% (target 75.00%)

Details

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 78.35%. Comparing base (4c7c5c0) to head (8b3f328).
✅ All tests successful. No failed tests found.

Additional details and impacted files 
@@            Coverage Diff             @@
##             main    #3952      +/-   ##
==========================================
+ Coverage   78.26%   78.35%   +0.09%     
==========================================
  Files         117      117              
  Lines       12633    12637       +4     
==========================================
+ Hits         9887     9902      +15     
+ Misses       2746     2735      -11
Files with missing lines Coverage Δ
src/scanpy/preprocessing/_highly_variable_genes.py 95.10% <100.00%> (+0.06%) ⬆️

... and 1 file with indirect coverage changes

View more details on Codecov