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Refactored scanpy.tools._sparse_nanmean to eliminate unnecessary data… #3570

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Refactored scanpy.tools._sparse_nanmean to eliminate unnecessary data… #3570

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Codecov / codecov/project succeeded Jan 12, 2026 in 0s

78.15% (target 75.00%)

View this Pull Request on Codecov

78.15% (target 75.00%)

Details

Codecov Report

❌ Patch coverage is 75.00000% with 2 lines in your changes missing coverage. Please review.
✅ Project coverage is 78.15%. Comparing base (98ff271) to head (8de0847).
⚠️ Report is 1 commits behind head on main.
✅ All tests successful. No failed tests found.

Files with missing lines Patch % Lines
src/scanpy/tools/_score_genes.py 75.00% 2 Missing ⚠️
Additional details and impacted files 
@@            Coverage Diff             @@
##             main    #3570      +/-   ##
==========================================
+ Coverage   78.01%   78.15%   +0.13%     
==========================================
  Files         117      117              
  Lines       12466    12555      +89     
==========================================
+ Hits         9725     9812      +87     
- Misses       2741     2743       +2
Files with missing lines Coverage Δ
src/scanpy/tools/_score_genes.py 84.46% <75.00%> (-2.33%) ⬇️

... and 2 files with indirect coverage changes

View more details on Codecov