Repositories list

• genericABM

  Public
  Generic Agent Base Modeling-Simulation

  Java

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 9, 2025Dec 9, 2025

• ECLIPSE_paper

  Public
  Script and data to generate figures from the paper

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 24, 2025Apr 24, 2025

• SantiagoSchoolVax

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 10, 2024Dec 10, 2024

• covid19geomodeller

  Public
  Covid Geomodeller

  Jupyter Notebook

  •

  MIT License

  •22 forks•44 stars•00 issues•00 pull requests•Updated Nov 21, 2024Nov 21, 2024

• epic-suite-project

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 21, 2024Nov 21, 2024

• epic-suite-gui

  Public
  TypeScript

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 9, 2024Sep 9, 2024

• PoC-NY-data

  Public
  This a proof of concept of the standardised data for the State of NY

  Jupyter Notebook

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 6, 2024May 6, 2024

• FONDEF-PID

  Public
  Python

  •00 forks•11 star•00 issues•00 pull requests•Updated Sep 13, 2023Sep 13, 2023

• Analitica-Minsal

  Public
  HTML

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Jun 16, 2023Jun 16, 2023

• analiticas_PID_SMA

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 16, 2023May 16, 2023

• article-nspef-pores

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated May 8, 2023May 8, 2023

• covid19_testingquarantines

  Public
  Jupyter Notebook

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 14, 2022Dec 14, 2022

• KaXim

  Public
  Kappa for Expanded Simulations

  C++

  •00 forks•11 star•11 issue•00 pull requests•Updated Dec 8, 2022Dec 8, 2022

• report-generator

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 18, 2022Aug 18, 2022

• upload_testing

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Apr 8, 2022Apr 8, 2022

• underreport

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 7, 2021Sep 7, 2021

• alphafold

  Public
  Open source code for AlphaFold.

  Python

  •

  Apache License 2.0

  •2.6k2.6k forks•00 stars•00 issues•00 pull requests•Updated Jul 31, 2021Jul 31, 2021

• article_nspef_membranes

  Public
  Jupyter Notebook

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 3, 2021Jun 3, 2021

• Datos-COVID19

  Public
  En formato estándar

  Jupyter Notebook

  •

  Other

  •951951 forks•00 stars•00 issues•00 pull requests•Updated Mar 28, 2021Mar 28, 2021

• Nengo

  Public
  Jupyter Notebook

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 2, 2020Nov 2, 2020

• excess-deaths

  Public
  Python

  •00 forks•00 stars•11 issue•00 pull requests•Updated Sep 16, 2020Sep 16, 2020

• neurocodes

  Public
  Public repository of developed scripts to read, process and create models.

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 13, 2019Nov 13, 2019

• BBRC

  Public
  Models for Biochemical and Biophysical Research Communications manuscript

  rule-based-modelinggillespie-algorithmkappa-language

  rule-based-modelinggillespie-algorithmkappa-language

  GNU General Public License v3.0

  •11 fork•00 stars•00 issues•00 pull requests•Updated Aug 21, 2018Aug 21, 2018

• PISKaS

  Public
  Parallel Implementation of a Spatial Kappa Simulator

  simulationkappa-language

  simulationkappa-language

  OCaml

  •

  GNU Lesser General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 17, 2018Jul 17, 2018

• RIP-MD

  Public
  HTML

  •44 forks•1515 stars•22 issues•00 pull requests•Updated Jun 26, 2018Jun 26, 2018

• ann_experiments

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 26, 2018Apr 26, 2018

• models

  Public
  Rule-Based Models

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 9, 2017Sep 9, 2017

• pleiades

  Public
  Developed software and relative work Ph.D. project "Rule-Based Models written in Kappa Language for Biological Processes"

  Python

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 21, 2017Aug 21, 2017

• DLab-scripts

  Public
  Scripts of the Computational Biology Lab (DLab)

  Tcl

  •22 forks•00 stars•00 issues•00 pull requests•Updated Mar 20, 2013Mar 20, 2013

• expander

  Public
  expands prekappa syntax and creates a kappa file

  Python

  •11 fork•22 stars•11 issue•00 pull requests•Updated Jan 6, 2012Jan 6, 2012