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Update to Java 17 and latest libraries

Status: Open.

#75 In gbif/embl-adapter;

· mike-podolskiy90 opened on Apr 1, 2026

java.nio.file.FileAlreadyExistsException: /mnt/auto/crawler/embl/dataset-with-hosts-raw-data-sequences.txt

Status: Open.

#74 In gbif/embl-adapter;

· djtfmartin opened on Apr 1, 2026

Embl adapter fail with Logback issue

Status: Open.

#55 In gbif/embl-adapter;

· fmendezh opened on Mar 5, 2025

Dependency Dashboard

dependencies

Status: Open.

#23 In gbif/embl-adapter;

· renovate opened on Oct 31, 2023

regex rules trying to map institutionCode / collectionCode when available

Status: Open.

#19 In gbif/embl-adapter;

· abubelinha opened on Jun 14, 2023

Capture taxonomy from scientificName

Status: Open.

#18 In gbif/embl-adapter;

· CecSve opened on Sep 23, 2022

Explore ENA Sample Metadata

Status: Open.

#16 In gbif/embl-adapter;

· timrobertson100 opened on May 2, 2022

Review if Targeted Locus Study (TLS) and Transcriptome Shotgun Assembly (TSA) should be included

Status: Open.

#13 In gbif/embl-adapter;

· timrobertson100 opened on Jul 8, 2021

Reformat values in the associatedTaxa field

Status: Open.

#12 In gbif/embl-adapter;

· ManonGros opened on Jun 28, 2021

Capture identifiers in culture_collection and/or strain fields

Status: Open.

#7 In gbif/embl-adapter;

· thomasstjerne opened on Feb 11, 2021

Document the complete mapping from EMBL API to DwC-A

Status: Open.

#5 In gbif/embl-adapter;

· timrobertson100 opened on Dec 1, 2020