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LINUXkommandos.pdf
LINUXkommandos.pdf
 
 
README.docx
README.docx
 
 
Snakemake_log_Rene.docx
Snakemake_log_Rene.docx
 
 
all_tax_plot.txt
all_tax_plot.txt
 
 
awk_sed_grep_cut_etc.bash
awk_sed_grep_cut_etc.bash
 
 
callisto_to_concoct.txt
callisto_to_concoct.txt
 
 
commands_etc.txt
commands_etc.txt
 
 
connecting_data.txt
connecting_data.txt
 
 
count_genes.awk
count_genes.awk
 
 
count_genes2.bash
count_genes2.bash
 
 
count_multiple_genes.bash
count_multiple_genes.bash
 
 
cut_f_janine.txt
cut_f_janine.txt
 
 
cut_r_janine.txt
cut_r_janine.txt
 
 
extract_contig_sequences.bash
extract_contig_sequences.bash
 
 
extract_genes_sequences_prokka.bash
extract_genes_sequences_prokka.bash
 
 
fasta_annotation_check_soxB.txt
fasta_annotation_check_soxB.txt
 
 
for loop.txt
for loop.txt
 
 
metagenomics-workshop.pdf
metagenomics-workshop.pdf
 
 
metaxa_to_R.txt
metaxa_to_R.txt
 
 
multiQC.txt
multiQC.txt
 
 
notepad++ wobble bases.bash
notepad++ wobble bases.bash
 
 
otu_rep_to_fasta.py
otu_rep_to_fasta.py
 
 
parse_prokka_output_parallel_glyph.sh
parse_prokka_output_parallel_glyph.sh
 
 
paths.txt
paths.txt
 
 
prokka_ec_for_loop.txt.bat
prokka_ec_for_loop.txt.bat
 
 
rep.fasta
rep.fasta
 
 
sbatch_fastuniq.txt
sbatch_fastuniq.txt
 
 
scp_kallisto_loop.bash
scp_kallisto_loop.bash
 
 
scp_loop.sh
scp_loop.sh
 
 
scp_upload_test.txt
scp_upload_test.txt
 
 
script_UPPMAX_logging.txt
script_UPPMAX_logging.txt
 
 
sicherung skripte schweden.txt
sicherung skripte schweden.txt
 
 
snakemake_install_and_assembly_start.txt
snakemake_install_and_assembly_start.txt
 
 
spass_mit_bash.bash
spass_mit_bash.bash
 
 
upload_christins_metatranscriptomes.txt
upload_christins_metatranscriptomes.txt
 
 

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bash, awk, grep, sed etc commands used in MobaXterm

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