Modified copyright in license header (resolves #989)

setup.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/batchSystems/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/batchSystems/abstractBatchSystem.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/batchSystems/gridengine.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/batchSystems/jobDispatcher.py

@@ -4,7 +4,7 @@
 # caching branch as well. The main semantic changes to JobDispatcher were wall time and the
 # IssuedJob stuff.
 
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/batchSystems/mesos/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/batchSystems/mesos/batchSystem.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/batchSystems/mesos/conftest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/batchSystems/mesos/executor.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/batchSystems/parasol.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/batchSystems/singleMachine.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/common.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/cwl/conftest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/job.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/jobStores/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/jobStores/abstractJobStore.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/jobStores/aws/jobStore.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/jobStores/aws/utils.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/jobStores/azureJobStore.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/jobStores/conftest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/jobStores/fileJobStore.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/jobWrapper.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/leader.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/lib/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/lib/bioio.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/lib/encryption/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/lib/encryption/_dummy.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/lib/encryption/_nacl.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/provisioners/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/provisioners/abstractProvisioner.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/provisioners/clusterScaler.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/realtimeLogger.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/resource.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/batchSystems/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/batchSystems/batchSystemTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/cwl/conftest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/jobStores/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/jobStores/jobStoreTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/mesos/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/mesos/helloWorld.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/mesos/mesosTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/mesos/stress.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/provisioners/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/provisioners/clusterScalerTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/sort/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/sort/lib.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/sort/sort.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/sort/sortTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/__init__.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/helloWorldTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/importExportFileTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/jobCacheEjectionTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/jobCacheTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/jobEncapsulationTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/jobFileStoreTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/jobServiceTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/jobTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/jobWrapperTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/promisedRequirementTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/promisesTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/realtimeLoggerTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/regularLogTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/resourceTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

src/toil/test/src/retainTempDirTest.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015 UCSC Computational Genomics Lab
+# Copyright (C) 2015-2016 Regents of the University of California
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.