diff --git a/Manifest.toml b/Manifest.toml index ffe0e5598..268b94479 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -1,13 +1,13 @@ # This file is machine-generated - editing it directly is not advised -julia_version = "1.11.7" +julia_version = "1.11.8" manifest_format = "2.0" project_hash = "2294ed99ca36fd3146a910892cadcb05f17b53a2" [[deps.ADTypes]] -git-tree-sha1 = "8b2b045b22740e4be20654175cc38291d48539db" +git-tree-sha1 = "f7304359109c768cf32dc5fa2d371565bb63b68a" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "1.20.0" +version = "1.21.0" weakdeps = ["ChainRulesCore", "ConstructionBase", "EnzymeCore"] [deps.ADTypes.extensions] @@ -33,10 +33,18 @@ uuid = "99985d1d-32ba-4be9-9821-2ec096f28918" version = "0.5.24" [[deps.AbstractMCMC]] -deps = ["BangBang", "ConsoleProgressMonitor", "Distributed", "FillArrays", "LogDensityProblems", "Logging", "LoggingExtras", "ProgressLogging", "Random", "StatsBase", "TerminalLoggers", "Transducers", "UUIDs"] -git-tree-sha1 = "64c15bc9be4a9ab588d8b90c5ebf633ef67afb73" +deps = ["BangBang", "ConsoleProgressMonitor", "Dates", "Distributed", "FillArrays", "LogDensityProblems", "Logging", "LoggingExtras", "ProgressLogging", "Random", "StatsBase", "TerminalLoggers", "Transducers", "UUIDs"] +git-tree-sha1 = "93bda89bb8d4bd3fb111fc5d8f31c8751fcca72c" uuid = "80f14c24-f653-4e6a-9b94-39d6b0f70001" -version = "5.10.0" +version = "5.11.0" + + [deps.AbstractMCMC.extensions] + AbstractMCMCOnlineStatsExt = "OnlineStats" + AbstractMCMCTensorBoardLoggerExt = "TensorBoardLogger" + + [deps.AbstractMCMC.weakdeps] + OnlineStats = "a15396b6-48d5-5d58-9928-6d29437db91e" + TensorBoardLogger = "899adc3e-224a-11e9-021f-63837185c80f" [[deps.AbstractPPL]] deps = ["AbstractMCMC", "Accessors", "DensityInterface", "JSON", "LinearAlgebra", "Random", "StatsBase"] @@ -122,9 +130,9 @@ weakdeps = ["DiffResults", "ForwardDiff", "MCMCChains", "StructArrays"] [[deps.AdvancedPS]] deps = ["AbstractMCMC", "Distributions", "Random", "Random123", "Requires", "SSMProblems", "StatsFuns"] -git-tree-sha1 = "5d34d826ece67ce790d4a7f3f97d837e52aba7f8" +git-tree-sha1 = "d92dd3fb4cc2748860ae8d5dd1d324cf0715a53b" uuid = "576499cb-2369-40b2-a588-c64705576edc" -version = "0.7.0" +version = "0.7.2" weakdeps = ["Libtask"] [deps.AdvancedPS.extensions] @@ -132,9 +140,9 @@ weakdeps = ["Libtask"] [[deps.AdvancedVI]] deps = ["ADTypes", "Accessors", "ChainRulesCore", "DiffResults", "DifferentiationInterface", "Distributions", "DocStringExtensions", "FillArrays", "Functors", "LinearAlgebra", "LogDensityProblems", "Optimisers", "ProgressMeter", "Random", "StatsBase"] -git-tree-sha1 = "9196795a7474c48ec7d73056a52a786e61dac062" +git-tree-sha1 = "a0803d1f1bdb46f051f8b580c639569cc8d09dd5" uuid = "b5ca4192-6429-45e5-a2d9-87aec30a685c" -version = "0.6.0" +version = "0.6.1" weakdeps = ["Bijectors", "Enzyme", "Mooncake", "ReverseDiff"] [deps.AdvancedVI.extensions] @@ -177,10 +185,10 @@ uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97" version = "0.5.4" [[deps.Arpack_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "OpenBLAS_jll", "Pkg"] -git-tree-sha1 = "5ba6c757e8feccf03a1554dfaf3e26b3cfc7fd5e" +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "libblastrampoline_jll"] +git-tree-sha1 = "7f54761502ff149a9d492e4acefe9805898e29b3" uuid = "68821587-b530-5797-8361-c406ea357684" -version = "3.5.1+1" +version = "3.5.2+0" [[deps.ArrayInterface]] deps = ["Adapt", "LinearAlgebra"] @@ -262,9 +270,9 @@ version = "0.4.8" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "3ecdc34639e1b8b8217820af18e5850e8e78f1a7" +git-tree-sha1 = "02fa77c70ba84361b9bc9ff28523bd9d78519265" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.10.2" +version = "1.11.0" [deps.BandedMatrices.extensions] BandedMatricesSparseArraysExt = "SparseArrays" @@ -307,9 +315,9 @@ version = "0.1.1" [[deps.Bijectors]] deps = ["ArgCheck", "ChainRulesCore", "ChangesOfVariables", "Distributions", "DocStringExtensions", "Functors", "InverseFunctions", "IrrationalConstants", "LinearAlgebra", "LogExpFunctions", "MappedArrays", "Random", "Reexport", "Roots", "SparseArrays", "Statistics"] -git-tree-sha1 = "bbdaafb28e31f2948916670a8eb7fd94ec12406f" +git-tree-sha1 = "d4933f88f810df3362da9cbd3f1c86ed9e5ed09b" uuid = "76274a88-744f-5084-9051-94815aaf08c4" -version = "0.15.14" +version = "0.15.15" weakdeps = ["ChainRules", "DistributionsAD", "EnzymeCore", "ForwardDiff", "LazyArrays", "Mooncake", "ReverseDiff"] [deps.Bijectors.extensions] @@ -382,9 +390,9 @@ version = "1.9.0" [[deps.BracketingNonlinearSolve]] deps = ["CommonSolve", "ConcreteStructs", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase"] -git-tree-sha1 = "03100f03a58e14c60ba0a465e6f1ac9450eb495c" +git-tree-sha1 = "750f782fcc7e09283be7d8a7aa687a95e4911b60" uuid = "70df07ce-3d50-431d-a3e7-ca6ddb60ac1e" -version = "1.6.0" +version = "1.6.2" weakdeps = ["ChainRulesCore", "ForwardDiff"] [deps.BracketingNonlinearSolve.extensions] @@ -426,10 +434,26 @@ uuid = "7057c7e9-c182-5462-911a-8362d720325c" version = "0.3.14" [[deps.CategoricalArrays]] -deps = ["DataAPI", "Future", "Missings", "Printf", "Requires", "Statistics", "Unicode"] -git-tree-sha1 = "5084cc1a28976dd1642c9f337b28a3cb03e0f7d2" +deps = ["Compat", "DataAPI", "Future", "Missings", "Printf", "Requires", "Statistics", "Unicode"] +git-tree-sha1 = "73acb4ed51b1855e1b5ce5c610334363a98d13f1" uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597" -version = "0.10.7" +version = "1.0.2" + + [deps.CategoricalArrays.extensions] + CategoricalArraysArrowExt = "Arrow" + CategoricalArraysJSONExt = "JSON" + CategoricalArraysRecipesBaseExt = "RecipesBase" + CategoricalArraysSentinelArraysExt = "SentinelArrays" + CategoricalArraysStatsBaseExt = "StatsBase" + CategoricalArraysStructTypesExt = "StructTypes" + + [deps.CategoricalArrays.weakdeps] + Arrow = "69666777-d1a9-59fb-9406-91d4454c9d45" + JSON = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" + RecipesBase = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" + SentinelArrays = "91c51154-3ec4-41a3-a24f-3f23e20d615c" + StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" + StructTypes = "856f2bd8-1eba-4b0a-8007-ebc267875bd4" [[deps.ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "SparseInverseSubset", "Statistics", "StructArrays", "SuiteSparse"] @@ -519,14 +543,14 @@ uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" version = "0.13.1" [[deps.Combinatorics]] -git-tree-sha1 = "8010b6bb3388abe68d95743dcbea77650bb2eddf" +git-tree-sha1 = "c761b00e7755700f9cdf5b02039939d1359330e1" uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" -version = "1.0.3" +version = "1.1.0" [[deps.CommonSolve]] -git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" +git-tree-sha1 = "78ea4ddbcf9c241827e7035c3a03e2e456711470" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.4" +version = "0.2.6" [[deps.CommonSubexpressions]] deps = ["MacroTools"] @@ -652,10 +676,10 @@ uuid = "244e2a9f-e319-4986-a169-4d1fe445cd52" version = "0.1.2" [[deps.DelayDiffEq]] -deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "FastBroadcast", "ForwardDiff", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "OrdinaryDiffEqCore", "OrdinaryDiffEqDefault", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqFunctionMap", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqRosenbrock", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SimpleUnPack", "SymbolicIndexingInterface"] -git-tree-sha1 = "76fa8e204712a38bb2d00590dd527468775df155" +deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "FastBroadcast", "ForwardDiff", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "OrdinaryDiffEqCore", "OrdinaryDiffEqDefault", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqFunctionMap", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqRosenbrock", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SymbolicIndexingInterface"] +git-tree-sha1 = "3bb871aa4a73f6972f7597c9ff4a4dccc1830b68" uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb" -version = "5.61.1" +version = "5.66.0" [[deps.DelimitedFiles]] deps = ["Mmap"] @@ -670,10 +694,10 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d" version = "0.4.0" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "TruncatedStacktraces"] -git-tree-sha1 = "d7259aa30ff9c4a512513d119882e3df3e656238" +deps = ["ArrayInterface", "BracketingNonlinearSolve", "ConcreteStructs", "DocStringExtensions", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "SymbolicIndexingInterface", "TruncatedStacktraces"] +git-tree-sha1 = "0514bf55835444420ce81f8e32c5e2369d4af456" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.192.0" +version = "6.199.0" [deps.DiffEqBase.extensions] DiffEqBaseCUDAExt = "CUDA" @@ -709,23 +733,24 @@ version = "6.192.0" Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d" [[deps.DiffEqCallbacks]] -deps = ["ConcreteStructs", "DataStructures", "DiffEqBase", "DifferentiationInterface", "LinearAlgebra", "Markdown", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "448d118c4a7763b041fc41cf91c85d23773f1dc2" +deps = ["ConcreteStructs", "DataStructures", "DiffEqBase", "DifferentiationInterface", "LinearAlgebra", "Markdown", "PrecompileTools", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] +git-tree-sha1 = "f17b863c2d5d496363fe36c8d8535cc6a33c9952" uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def" -version = "4.10.1" +version = "4.12.0" weakdeps = ["Functors"] [deps.DiffEqCallbacks.extensions] DiffEqCallbacksFunctorsExt = "Functors" [[deps.DiffEqNoiseProcess]] -deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "516d553f5deee7c55b2945b5edf05b6542837887" +deps = ["CommonSolve", "DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "PoissonRandom", "QuadGK", "Random", "Random123", "RecipesBase", "RecursiveArrayTools", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"] +git-tree-sha1 = "76fbb6985dda2aba32c97148540ad2c043e741e3" uuid = "77a26b50-5914-5dd7-bc55-306e6241c503" -version = "5.24.1" -weakdeps = ["ReverseDiff"] +version = "5.26.0" +weakdeps = ["Optim", "ReverseDiff"] [deps.DiffEqNoiseProcess.extensions] + DiffEqNoiseProcessOptimExt = "Optim" DiffEqNoiseProcessReverseDiffExt = "ReverseDiff" [[deps.DiffResults]] @@ -748,9 +773,9 @@ version = "7.17.0" [[deps.DifferentiationInterface]] deps = ["ADTypes", "LinearAlgebra"] -git-tree-sha1 = "80bd15222b3e8d0bc70d921d2201aa0084810ce5" +git-tree-sha1 = "44d9321761ed99e1d444b5081b3166d3259adcf0" uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63" -version = "0.7.12" +version = "0.7.14" [deps.DifferentiationInterface.extensions] DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore" @@ -798,9 +823,9 @@ version = "0.7.12" [[deps.DispatchDoctor]] deps = ["MacroTools", "Preferences"] -git-tree-sha1 = "fc34127e78323c49984e1a146d577d0f890dd2b4" +git-tree-sha1 = "fc5e4798a96c4a7ffa2991bb5b372262578587a9" uuid = "8d63f2c5-f18a-4cf2-ba9d-b3f60fc568c8" -version = "0.4.26" +version = "0.4.27" weakdeps = ["ChainRulesCore", "EnzymeCore"] [deps.DispatchDoctor.extensions] @@ -825,9 +850,9 @@ version = "1.11.0" [[deps.Distributions]] deps = ["AliasTables", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "3bc002af51045ca3b47d2e1787d6ce02e68b943a" +git-tree-sha1 = "fbcc7610f6d8348428f722ecbe0e6cfe22e672c6" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.122" +version = "0.25.123" weakdeps = ["ChainRulesCore", "DensityInterface", "Test"] [deps.Distributions.extensions] @@ -860,15 +885,15 @@ version = "1.6.0" [[deps.DynamicHMC]] deps = ["ArgCheck", "DocStringExtensions", "FillArrays", "LinearAlgebra", "LogDensityProblems", "LogExpFunctions", "ProgressMeter", "Random", "Statistics", "TensorCast"] -git-tree-sha1 = "08f33c9cce36fe618efc6d37c24c157eef5f752e" +git-tree-sha1 = "3d22b5806afd1c5d675554f8e0d7a21b03e68237" uuid = "bbc10e6e-7c05-544b-b16e-64fede858acb" -version = "3.5.1" +version = "3.6.0" [[deps.DynamicPPL]] deps = ["ADTypes", "AbstractMCMC", "AbstractPPL", "Accessors", "BangBang", "Bijectors", "Chairmarks", "Compat", "ConstructionBase", "DifferentiationInterface", "Distributions", "DocStringExtensions", "InteractiveUtils", "LinearAlgebra", "LogDensityProblems", "MacroTools", "OrderedCollections", "Printf", "Random", "Statistics", "Test"] -git-tree-sha1 = "b87bc878118011066248821177ba26b62a999248" +git-tree-sha1 = "ab44ce7a462be99e4a43c49213ae2e39c8c83693" uuid = "366bfd00-2699-11ea-058f-f148b4cae6d8" -version = "0.39.1" +version = "0.39.12" [deps.DynamicPPL.extensions] DynamicPPLChainRulesCoreExt = ["ChainRulesCore"] @@ -896,15 +921,15 @@ uuid = "cad2338a-1db2-11e9-3401-43bc07c9ede2" version = "2.0.0" [[deps.EnumX]] -git-tree-sha1 = "bddad79635af6aec424f53ed8aad5d7555dc6f00" +git-tree-sha1 = "7bebc8aad6ee6217c78c5ddcf7ed289d65d0263e" uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" -version = "1.0.5" +version = "1.0.6" [[deps.Enzyme]] deps = ["CEnum", "EnzymeCore", "Enzyme_jll", "GPUCompiler", "InteractiveUtils", "LLVM", "Libdl", "LinearAlgebra", "ObjectFile", "PrecompileTools", "Preferences", "Printf", "Random", "SparseArrays"] -git-tree-sha1 = "af32c93dfb17c5f78c90e45f4547e6733552d78a" +git-tree-sha1 = "2e255d8a2944ae78ed0fa48ea6570bdc964073f4" uuid = "7da242da-08ed-463a-9acd-ee780be4f1d9" -version = "0.13.108" +version = "0.13.118" [deps.Enzyme.extensions] EnzymeBFloat16sExt = "BFloat16s" @@ -924,19 +949,20 @@ version = "0.13.108" StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" [[deps.EnzymeCore]] -git-tree-sha1 = "820f06722a87d9544f42679182eb0850690f9b45" +git-tree-sha1 = "990991b8aa76d17693a98e3a915ac7aa49f08d1a" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.8.17" -weakdeps = ["Adapt"] +version = "0.8.18" +weakdeps = ["Adapt", "ChainRulesCore"] [deps.EnzymeCore.extensions] AdaptExt = "Adapt" + EnzymeCoreChainRulesCoreExt = "ChainRulesCore" [[deps.Enzyme_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "6096df88a1bc09afb9a1c85d4e54ed085a95e799" +git-tree-sha1 = "97d6bfda1bd724fdf2930e66bd74a4b99b1cc822" uuid = "7cc45869-7501-5eee-bdea-0790c847d4ef" -version = "0.0.221+0" +version = "0.0.238+0" [[deps.EpollShim_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -958,9 +984,9 @@ version = "2.7.3+0" [[deps.ExponentialUtilities]] deps = ["Adapt", "ArrayInterface", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "PrecompileTools", "Printf", "SparseArrays", "libblastrampoline_jll"] -git-tree-sha1 = "664daa6edba2f1cc848d5a4cd1928306919238cc" +git-tree-sha1 = "cc294ead6a85e975a8519dd4a0a6cb294eeb18d1" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.28.0" +version = "1.30.0" weakdeps = ["StaticArrays"] [deps.ExponentialUtilities.extensions] @@ -971,6 +997,11 @@ git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" version = "0.1.10" +[[deps.ExpressionExplorer]] +git-tree-sha1 = "4a8c0a9eebf807ac42f0f6de758e60a20be25ffb" +uuid = "21656369-7473-754a-2065-74616d696c43" +version = "1.1.3" + [[deps.ExproniconLite]] git-tree-sha1 = "c13f0b150373771b0fdc1713c97860f8df12e6c2" uuid = "55351af7-c7e9-48d6-89ff-24e801d99491" @@ -984,21 +1015,15 @@ version = "0.4.5" [[deps.FFMPEG_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "PCRE2_jll", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] -git-tree-sha1 = "ccc81ba5e42497f4e76553a5545665eed577a663" +git-tree-sha1 = "01ba9d15e9eae375dc1eb9589df76b3572acd3f2" uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5" -version = "8.0.0+0" - -[[deps.FFTW]] -deps = ["AbstractFFTs", "FFTW_jll", "Libdl", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] -git-tree-sha1 = "97f08406df914023af55ade2f843c39e99c5d969" -uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.10.0" +version = "8.0.1+0" -[[deps.FFTW_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "6d6219a004b8cf1e0b4dbe27a2860b8e04eba0be" -uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a" -version = "3.3.11+0" +[[deps.FFTA]] +deps = ["AbstractFFTs", "DocStringExtensions", "LinearAlgebra", "MuladdMacro", "Primes", "Random", "Reexport"] +git-tree-sha1 = "65e55303b72f4a567a51b174dd2c47496efeb95a" +uuid = "b86e33f2-c0db-4aa1-a6e0-ab43e668529e" +version = "0.3.1" [[deps.FLoops]] deps = ["BangBang", "Compat", "FLoopsBase", "InitialValues", "JuliaVariables", "MLStyle", "Serialization", "Setfield", "Transducers"] @@ -1014,9 +1039,9 @@ version = "0.1.1" [[deps.FastAlmostBandedMatrices]] deps = ["ArrayInterface", "ArrayLayouts", "BandedMatrices", "ConcreteStructs", "LazyArrays", "LinearAlgebra", "MatrixFactorizations", "PrecompileTools", "Reexport"] -git-tree-sha1 = "9482a2b4face8ade73792c23a54796c79ed1bcbf" +git-tree-sha1 = "3733dfb413e2a87c790cdf34f32f2c6a6f7fb95e" uuid = "9d29842c-ecb8-4973-b1e9-a27b1157504e" -version = "0.1.5" +version = "0.1.6" [[deps.FastBroadcast]] deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] @@ -1036,9 +1061,9 @@ uuid = "442a2c76-b920-505d-bb47-c5924d526838" version = "1.1.0" [[deps.FastPower]] -git-tree-sha1 = "e47c70bf430175e077d1955d7f04923504acc74c" +git-tree-sha1 = "1dd291358e0e3a31f77dbbb76ce7abbcca38d410" uuid = "a4df4552-cc26-4903-aec0-212e50a0e84b" -version = "1.2.0" +version = "1.3.0" [deps.FastPower.extensions] FastPowerEnzymeExt = "Enzyme" @@ -1085,14 +1110,15 @@ version = "1.11.0" [[deps.FillArrays]] deps = ["LinearAlgebra"] -git-tree-sha1 = "5bfcd42851cf2f1b303f51525a54dc5e98d408a3" +git-tree-sha1 = "2f979084d1e13948a3352cf64a25df6bd3b4dca3" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.15.0" -weakdeps = ["PDMats", "SparseArrays", "Statistics"] +version = "1.16.0" +weakdeps = ["PDMats", "SparseArrays", "StaticArrays", "Statistics"] [deps.FillArrays.extensions] FillArraysPDMatsExt = "PDMats" FillArraysSparseArraysExt = "SparseArrays" + FillArraysStaticArraysExt = "StaticArrays" FillArraysStatisticsExt = "Statistics" [[deps.FiniteDiff]] @@ -1132,9 +1158,9 @@ version = "1.3.7" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"] -git-tree-sha1 = "cd33c7538e68650bd0ddbb3f5bd50a4a0fa95b50" +git-tree-sha1 = "b2977f86ed76484de6f29d5b36f2fa686f085487" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "1.3.0" +version = "1.3.1" weakdeps = ["StaticArrays"] [deps.ForwardDiff.extensions] @@ -1182,15 +1208,15 @@ version = "1.11.0" [[deps.GLFW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll", "libdecor_jll", "xkbcommon_jll"] -git-tree-sha1 = "fcb0584ff34e25155876418979d4c8971243bb89" +git-tree-sha1 = "b7bfd56fa66616138dfe5237da4dc13bbd83c67f" uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89" -version = "3.4.0+2" +version = "3.4.1+0" [[deps.GLM]] deps = ["Distributions", "LinearAlgebra", "Printf", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "StatsModels"] -git-tree-sha1 = "273bd1cd30768a2fddfa3fd63bbc746ed7249e5f" +git-tree-sha1 = "c5432ee4f7817ec542fa7cda3d96745880903606" uuid = "38e38edf-8417-5370-95a0-9cbb8c7f171a" -version = "1.9.0" +version = "1.9.2" [[deps.GPUArraysCore]] deps = ["Adapt"] @@ -1200,27 +1226,27 @@ version = "0.2.0" [[deps.GPUCompiler]] deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "PrecompileTools", "Preferences", "Scratch", "Serialization", "TOML", "Tracy", "UUIDs"] -git-tree-sha1 = "6e5a25bc455da8e8d88b6b7377e341e9af1929f0" +git-tree-sha1 = "7237207d87760307c92c260565f706688229cf6e" uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" -version = "1.7.5" +version = "1.8.1" [[deps.GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Preferences", "Printf", "Qt6Wayland_jll", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "p7zip_jll"] -git-tree-sha1 = "f305bdb91e1f3fcc687944c97f2ede40585b1bd5" +git-tree-sha1 = "6949039c4db076a5967228bf9d7b6f32f2324328" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.73.19" +version = "0.73.20" [deps.GR.extensions] - GRIJuliaExt = "IJulia" + IJuliaExt = "IJulia" [deps.GR.weakdeps] IJulia = "7073ff75-c697-5162-941a-fcdaad2a7d2a" [[deps.GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "FreeType2_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt6Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "de439fbc02b9dc0e639e67d7c5bd5811ff3b6f06" +git-tree-sha1 = "04a6eb1e57dc3a6992b5af5aa753a2f8d3a1028e" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.73.19+1" +version = "0.73.20+0" [[deps.GenericSchur]] deps = ["LinearAlgebra", "Printf"] @@ -1330,6 +1356,11 @@ version = "1.4.5" ArrowTypes = "31f734f8-188a-4ce0-8406-c8a06bd891cd" Parsers = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" +[[deps.IntegerMathUtils]] +git-tree-sha1 = "4c1acff2dc6b6967e7e750633c50bc3b8d83e617" +uuid = "18e54dd8-cb9d-406c-a71d-865a43cbb235" +version = "0.1.3" + [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl"] git-tree-sha1 = "ec1debd61c300961f98064cfb21287613ad7f303" @@ -1410,9 +1441,9 @@ version = "1.7.1" [[deps.JSON]] deps = ["Dates", "Logging", "Parsers", "PrecompileTools", "StructUtils", "UUIDs", "Unicode"] -git-tree-sha1 = "5b6bb73f555bc753a6153deec3717b8904f5551c" +git-tree-sha1 = "b3ad4a0255688dcb895a52fafbaae3023b588a90" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "1.3.0" +version = "1.4.0" [deps.JSON.extensions] JSONArrowExt = ["ArrowTypes"] @@ -1428,9 +1459,9 @@ version = "0.2.1" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "4255f0032eafd6451d707a51d5f0248b8a165e4d" +git-tree-sha1 = "b6893345fd6658c8e475d40155789f4860ac3b21" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "3.1.3+0" +version = "3.1.4+0" [[deps.JuliaVariables]] deps = ["MLStyle", "NameResolution"] @@ -1439,10 +1470,10 @@ uuid = "b14d175d-62b4-44ba-8fb7-3064adc8c3ec" version = "0.2.4" [[deps.JumpProcesses]] -deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "PoissonRandom", "Random", "RecursiveArrayTools", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "SymbolicIndexingInterface", "UnPack"] -git-tree-sha1 = "746d3ac930339ca8a37590892c98493fba89e9d3" +deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "PoissonRandom", "Random", "RecursiveArrayTools", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "SymbolicIndexingInterface"] +git-tree-sha1 = "0593944281222db3b3f3bc1cfe2c464a17f9eea1" uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5" -version = "9.19.2" +version = "9.21.0" weakdeps = ["Adapt", "FastBroadcast", "KernelAbstractions"] [deps.JumpProcesses.extensions] @@ -1461,22 +1492,22 @@ weakdeps = ["EnzymeCore", "LinearAlgebra", "SparseArrays"] SparseArraysExt = "SparseArrays" [[deps.KernelDensity]] -deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "ba51324b894edaf1df3ab16e2cc6bc3280a2f1a7" +deps = ["Distributions", "DocStringExtensions", "FFTA", "Interpolations", "StatsBase"] +git-tree-sha1 = "4260cfc991b8885bf747801fb60dd4503250e478" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.10" +version = "0.6.11" [[deps.KernelFunctions]] deps = ["ChainRulesCore", "Compat", "CompositionsBase", "Distances", "FillArrays", "Functors", "IrrationalConstants", "LinearAlgebra", "LogExpFunctions", "Random", "Requires", "SpecialFunctions", "Statistics", "StatsBase", "TensorCore", "Test", "ZygoteRules"] -git-tree-sha1 = "0b75b447ee242254ff037402461e5593a84f9ac7" +git-tree-sha1 = "9db545feadff48ec2da8216f589857e7a619df84" uuid = "ec8451be-7e33-11e9-00cf-bbf324bd1392" -version = "0.10.66" +version = "0.10.67" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "09895a8e17b0aa97df8964ed13c94d1b6d9de666" +git-tree-sha1 = "125d65fe5042faf078383312dd060adf11d90802" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.10.3" +version = "0.10.5" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1623,9 +1654,9 @@ version = "1.11.0+1" [[deps.LibTracyClient_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "d2bc4e1034b2d43076b50f0e34ea094c2cb0a717" +git-tree-sha1 = "d4e20500d210247322901841d4eafc7a0c52642d" uuid = "ad6e5548-8b26-5c9f-8ef3-ef0ad883f3a5" -version = "0.9.1+6" +version = "0.13.1+0" [[deps.Libdl]] uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" @@ -1674,10 +1705,10 @@ uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700" version = "2.41.2+0" [[deps.LineSearch]] -deps = ["ADTypes", "CommonSolve", "ConcreteStructs", "FastClosures", "LinearAlgebra", "MaybeInplace", "SciMLBase", "SciMLJacobianOperators", "StaticArraysCore"] -git-tree-sha1 = "97d502765cc5cf3a722120f50da03c2474efce04" +deps = ["ADTypes", "CommonSolve", "ConcreteStructs", "FastClosures", "LinearAlgebra", "MaybeInplace", "PrecompileTools", "SciMLBase", "SciMLJacobianOperators", "StaticArraysCore"] +git-tree-sha1 = "9f7253c0574b4b585c8909232adb890930da980a" uuid = "87fe0de2-c867-4266-b59a-2f0a94fc965b" -version = "0.1.4" +version = "0.1.6" weakdeps = ["LineSearches"] [deps.LineSearch.extensions] @@ -1695,10 +1726,10 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" version = "1.11.0" [[deps.LinearSolve]] -deps = ["ArrayInterface", "ChainRulesCore", "ConcreteStructs", "DocStringExtensions", "EnumX", "GPUArraysCore", "InteractiveUtils", "Krylov", "LazyArrays", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "OpenBLAS_jll", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLLogging", "SciMLOperators", "Setfield", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "006238a52d94ee8618c9f905fbabb177d37e4db0" +deps = ["ArrayInterface", "ChainRulesCore", "ConcreteStructs", "DocStringExtensions", "EnumX", "GPUArraysCore", "InteractiveUtils", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "OpenBLAS_jll", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLLogging", "SciMLOperators", "Setfield", "StaticArraysCore"] +git-tree-sha1 = "1fdeafa25801ec2e0caa88fbe0afd7c41d3d087a" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "3.48.1" +version = "3.57.0" [deps.LinearSolve.extensions] LinearSolveAMDGPUExt = "AMDGPU" @@ -1709,7 +1740,7 @@ version = "3.48.1" LinearSolveCUDSSExt = "CUDSS" LinearSolveCUSOLVERRFExt = ["CUSOLVERRF", "SparseArrays"] LinearSolveCliqueTreesExt = ["CliqueTrees", "SparseArrays"] - LinearSolveEnzymeExt = "EnzymeCore" + LinearSolveEnzymeExt = ["EnzymeCore", "SparseArrays"] LinearSolveFastAlmostBandedMatricesExt = "FastAlmostBandedMatrices" LinearSolveFastLapackInterfaceExt = "FastLapackInterface" LinearSolveForwardDiffExt = "ForwardDiff" @@ -1806,25 +1837,26 @@ uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" version = "1.2.0" [[deps.Lux]] -deps = ["ADTypes", "Adapt", "ArgCheck", "ArrayInterface", "ChainRulesCore", "Compat", "ConcreteStructs", "DiffResults", "DispatchDoctor", "EnzymeCore", "FastClosures", "ForwardDiff", "Functors", "GPUArraysCore", "LinearAlgebra", "LuxCore", "LuxLib", "MLDataDevices", "MacroTools", "Markdown", "NNlib", "Optimisers", "Preferences", "Random", "Reexport", "SIMDTypes", "Setfield", "Static", "StaticArraysCore", "Statistics", "WeightInitializers"] -git-tree-sha1 = "c300d2df439a343a840dd8ef6b0910ce4cafc8c6" +deps = ["ADTypes", "Adapt", "ArrayInterface", "ChainRulesCore", "ConcreteStructs", "DiffResults", "DispatchDoctor", "EnzymeCore", "FastClosures", "ForwardDiff", "Functors", "GPUArraysCore", "LinearAlgebra", "LuxCore", "LuxLib", "MLDataDevices", "MacroTools", "Markdown", "NNlib", "Optimisers", "PrecompileTools", "Preferences", "Random", "ReactantCore", "Reexport", "SciMLPublic", "Setfield", "Static", "StaticArraysCore", "Statistics", "UUIDs", "WeightInitializers"] +git-tree-sha1 = "e5ee34d1731d3b343dd3babfcdef33777a946bdd" uuid = "b2108857-7c20-44ae-9111-449ecde12c47" -version = "1.21.1" +version = "1.29.6" [deps.Lux.extensions] - LuxComponentArraysExt = "ComponentArrays" - LuxEnzymeExt = "Enzyme" - LuxFluxExt = "Flux" - LuxLossFunctionsExt = "LossFunctions" - LuxMLUtilsExt = "MLUtils" - LuxMPIExt = "MPI" - LuxMPINCCLExt = ["CUDA", "MPI", "NCCL"] - LuxMooncakeExt = "Mooncake" - LuxReactantExt = ["Enzyme", "Reactant", "ReactantCore"] - LuxReverseDiffExt = ["FunctionWrappers", "ReverseDiff"] - LuxSimpleChainsExt = "SimpleChains" - LuxTrackerExt = "Tracker" - LuxZygoteExt = "Zygote" + ComponentArraysExt = "ComponentArrays" + EnzymeExt = "Enzyme" + FluxExt = "Flux" + GPUArraysExt = "GPUArrays" + LossFunctionsExt = "LossFunctions" + MLUtilsExt = "MLUtils" + MPIExt = "MPI" + MPINCCLExt = ["CUDA", "MPI", "NCCL"] + MooncakeExt = "Mooncake" + ReactantExt = ["Enzyme", "Reactant"] + ReverseDiffExt = ["FunctionWrappers", "ReverseDiff"] + SimpleChainsExt = "SimpleChains" + TrackerExt = "Tracker" + ZygoteExt = "Zygote" [deps.Lux.weakdeps] CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" @@ -1832,13 +1864,13 @@ version = "1.21.1" Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" Flux = "587475ba-b771-5e3f-ad9e-33799f191a9c" FunctionWrappers = "069b7b12-0de2-55c6-9aab-29f3d0a68a2e" + GPUArrays = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" LossFunctions = "30fc2ffe-d236-52d8-8643-a9d8f7c094a7" MLUtils = "f1d291b0-491e-4a28-83b9-f70985020b54" MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195" Mooncake = "da2b9cff-9c12-43a0-ae48-6db2b0edb7d6" NCCL = "3fe64909-d7a1-4096-9b7d-7a0f12cf0f6b" Reactant = "3c362404-f566-11ee-1572-e11a4b42c853" - ReactantCore = "a3311ec8-5e00-46d5-b541-4f83e724a433" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" SimpleChains = "de6bee2f-e2f4-4ec7-b6ed-219cc6f6e9e5" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" @@ -1846,19 +1878,20 @@ version = "1.21.1" [[deps.LuxCore]] deps = ["DispatchDoctor", "Random", "SciMLPublic"] -git-tree-sha1 = "ee3794a2ca3022bc066b5fb87b135c1d5f3b1cb7" +git-tree-sha1 = "9455b1e829d8dacad236143869be70b7fdb826b8" uuid = "bb33d45b-7691-41d6-9220-0943567d0623" -version = "1.4.2" +version = "1.5.3" [deps.LuxCore.extensions] - LuxCoreArrayInterfaceReverseDiffExt = ["ArrayInterface", "ReverseDiff"] - LuxCoreArrayInterfaceTrackerExt = ["ArrayInterface", "Tracker"] - LuxCoreChainRulesCoreExt = "ChainRulesCore" - LuxCoreEnzymeCoreExt = "EnzymeCore" - LuxCoreFunctorsExt = "Functors" - LuxCoreMLDataDevicesExt = ["Adapt", "MLDataDevices"] - LuxCoreReactantExt = "Reactant" - LuxCoreSetfieldExt = "Setfield" + ArrayInterfaceReverseDiffExt = ["ArrayInterface", "ReverseDiff"] + ArrayInterfaceTrackerExt = ["ArrayInterface", "Tracker"] + ChainRulesCoreExt = "ChainRulesCore" + EnzymeCoreExt = "EnzymeCore" + FluxExt = "Flux" + FunctorsExt = "Functors" + MLDataDevicesExt = ["Adapt", "MLDataDevices"] + ReactantExt = "Reactant" + SetfieldExt = "Setfield" [deps.LuxCore.weakdeps] Adapt = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" @@ -1874,25 +1907,27 @@ version = "1.4.2" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" [[deps.LuxLib]] -deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "DispatchDoctor", "EnzymeCore", "FastClosures", "ForwardDiff", "Functors", "KernelAbstractions", "LinearAlgebra", "LuxCore", "MLDataDevices", "Markdown", "NNlib", "Preferences", "Random", "Reexport", "SciMLPublic", "Static", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "cc39eeeadf8a40c2f851fcad1e0f1397a45fecfb" +deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "DispatchDoctor", "EnzymeCore", "FastClosures", "Functors", "KernelAbstractions", "LinearAlgebra", "LuxCore", "MLDataDevices", "Markdown", "NNlib", "Preferences", "Random", "Reexport", "SciMLPublic", "Static", "StaticArraysCore", "Statistics", "UUIDs"] +git-tree-sha1 = "bc4984518909e9c0bf78cc8bb837cb63534ab82c" uuid = "82251201-b29d-42c6-8e01-566dec8acb11" -version = "1.13.1" +version = "1.15.2" [deps.LuxLib.extensions] - LuxLibAppleAccelerateExt = "AppleAccelerate" - LuxLibBLISBLASExt = "BLISBLAS" - LuxLibCUDAExt = "CUDA" - LuxLibEnzymeExt = "Enzyme" - LuxLibLoopVectorizationExt = ["LoopVectorization", "Polyester"] - LuxLibMKLExt = "MKL" - LuxLibOctavianExt = ["Octavian", "LoopVectorization"] - LuxLibReactantExt = ["Reactant", "ReactantCore"] - LuxLibReverseDiffExt = "ReverseDiff" - LuxLibSLEEFPiratesExt = "SLEEFPirates" - LuxLibTrackerAMDGPUExt = ["AMDGPU", "Tracker"] - LuxLibTrackerExt = "Tracker" - LuxLibcuDNNExt = ["CUDA", "cuDNN"] + AppleAccelerateExt = "AppleAccelerate" + BLISBLASExt = "BLISBLAS" + CUDAExt = "CUDA" + CUDAForwardDiffExt = ["CUDA", "ForwardDiff"] + EnzymeExt = "Enzyme" + ForwardDiffExt = "ForwardDiff" + LoopVectorizationExt = ["LoopVectorization", "Polyester"] + MKLExt = "MKL" + OctavianExt = ["Octavian", "LoopVectorization"] + ReactantExt = ["Reactant", "ReactantCore"] + ReverseDiffExt = "ReverseDiff" + SLEEFPiratesExt = "SLEEFPirates" + TrackerAMDGPUExt = ["AMDGPU", "Tracker"] + TrackerExt = "Tracker" + cuDNNExt = ["CUDA", "cuDNN"] [deps.LuxLib.weakdeps] AMDGPU = "21141c5a-9bdb-4563-92ae-f87d6854732e" @@ -1900,6 +1935,7 @@ version = "1.13.1" BLISBLAS = "6f275bd8-fec0-4d39-945b-7e95a765fa1e" CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" LoopVectorization = "bdcacae8-1622-11e9-2a5c-532679323890" MKL = "33e6dc65-8f57-5167-99aa-e5a354878fb2" Octavian = "6fd5a793-0b7e-452c-907f-f8bfe9c57db4" @@ -1913,9 +1949,9 @@ version = "1.13.1" [[deps.MCMCChains]] deps = ["AbstractMCMC", "AxisArrays", "DataAPI", "Dates", "Distributions", "IteratorInterfaceExtensions", "KernelDensity", "LinearAlgebra", "MCMCDiagnosticTools", "MLJModelInterface", "NaturalSort", "OrderedCollections", "PrettyTables", "Random", "RecipesBase", "Statistics", "StatsBase", "StatsFuns", "TableTraits", "Tables"] -git-tree-sha1 = "4f5b84761bbfd1e99c2568815b1108858b760f4c" +git-tree-sha1 = "060d6bc7cf60e621dfd056ed2c1a2db1e68db0fe" uuid = "c7f686f2-ff18-58e9-bc7b-31028e88f75d" -version = "7.6.0" +version = "7.7.0" [[deps.MCMCDiagnosticTools]] deps = ["AbstractFFTs", "DataAPI", "DataStructures", "Distributions", "LinearAlgebra", "MLJModelInterface", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tables"] @@ -1937,29 +1973,30 @@ version = "1.0.0" [[deps.MLDataDevices]] deps = ["Adapt", "Functors", "Preferences", "Random", "SciMLPublic"] -git-tree-sha1 = "6326ed6481423cf4a0865de3b0ad8f50f2bfd227" +git-tree-sha1 = "117dd3d538d0ca82979ebcf15d9ad8bf0431c206" uuid = "7e8f7934-dd98-4c1a-8fe8-92b47a384d40" -version = "1.15.1" +version = "1.17.2" [deps.MLDataDevices.extensions] - MLDataDevicesAMDGPUExt = "AMDGPU" - MLDataDevicesCUDAExt = "CUDA" - MLDataDevicesChainRulesCoreExt = "ChainRulesCore" - MLDataDevicesChainRulesExt = "ChainRules" - MLDataDevicesComponentArraysExt = "ComponentArrays" - MLDataDevicesFillArraysExt = "FillArrays" - MLDataDevicesGPUArraysExt = "GPUArrays" - MLDataDevicesMLUtilsExt = "MLUtils" - MLDataDevicesMetalExt = ["GPUArrays", "Metal"] - MLDataDevicesOneHotArraysExt = "OneHotArrays" - MLDataDevicesReactantExt = "Reactant" - MLDataDevicesRecursiveArrayToolsExt = "RecursiveArrayTools" - MLDataDevicesReverseDiffExt = "ReverseDiff" - MLDataDevicesSparseArraysExt = "SparseArrays" - MLDataDevicesTrackerExt = "Tracker" - MLDataDevicesZygoteExt = "Zygote" - MLDataDevicescuDNNExt = ["CUDA", "cuDNN"] - MLDataDevicesoneAPIExt = ["GPUArrays", "oneAPI"] + AMDGPUExt = "AMDGPU" + CUDAExt = "CUDA" + ChainRulesCoreExt = "ChainRulesCore" + ChainRulesExt = "ChainRules" + ComponentArraysExt = "ComponentArrays" + FillArraysExt = "FillArrays" + GPUArraysSparseArraysExt = ["GPUArrays", "SparseArrays"] + MLUtilsExt = "MLUtils" + MetalExt = ["GPUArrays", "Metal"] + OneHotArraysExt = "OneHotArrays" + OpenCLExt = ["GPUArrays", "OpenCL"] + ReactantExt = "Reactant" + RecursiveArrayToolsExt = "RecursiveArrayTools" + ReverseDiffExt = "ReverseDiff" + SparseArraysExt = "SparseArrays" + TrackerExt = "Tracker" + ZygoteExt = "Zygote" + cuDNNExt = ["CUDA", "cuDNN"] + oneAPIExt = ["GPUArrays", "oneAPI"] [deps.MLDataDevices.weakdeps] AMDGPU = "21141c5a-9bdb-4563-92ae-f87d6854732e" @@ -1972,6 +2009,7 @@ version = "1.15.1" MLUtils = "f1d291b0-491e-4a28-83b9-f70985020b54" Metal = "dde4c033-4e86-420c-a63e-0dd931031962" OneHotArrays = "0b1bfda6-eb8a-41d2-88d8-f5af5cad476f" + OpenCL = "08131aa3-fb12-5dee-8b74-c09406e224a2" Reactant = "3c362404-f566-11ee-1572-e11a4b42c853" RecursiveArrayTools = "731186ca-8d62-57ce-b412-fbd966d074cd" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" @@ -1995,9 +2033,9 @@ version = "0.5.4" [[deps.MLJModelInterface]] deps = ["InteractiveUtils", "REPL", "Random", "ScientificTypesBase", "StatisticalTraits"] -git-tree-sha1 = "ccaa3f7938890ee8042cc970ba275115428bd592" +git-tree-sha1 = "c275fae2e693206b4527dd9d2382aa15359ef3ed" uuid = "e80e1ace-859a-464e-9ed9-23947d8ae3ea" -version = "1.12.0" +version = "1.12.1" [[deps.MLLabelUtils]] deps = ["LearnBase", "MappedArrays", "StatsBase"] @@ -2027,9 +2065,9 @@ uuid = "d125e4d3-2237-4719-b19c-fa641b8a4667" version = "0.1.8" [[deps.MappedArrays]] -git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" +git-tree-sha1 = "0ee4497a4e80dbd29c058fcee6493f5219556f40" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.2" +version = "0.4.3" [[deps.Markdown]] deps = ["Base64"] @@ -2101,9 +2139,9 @@ version = "0.8.1" [[deps.Mooncake]] deps = ["ADTypes", "ChainRules", "ChainRulesCore", "DispatchDoctor", "ExprTools", "Graphs", "LinearAlgebra", "MistyClosures", "Random", "Test"] -git-tree-sha1 = "0127d6b56adef8977212b5225628119fa5a65ffe" +git-tree-sha1 = "d49f255b638014e78affde6aa8be08ef282548e3" uuid = "da2b9cff-9c12-43a0-ae48-6db2b0edb7d6" -version = "0.4.182" +version = "0.4.203" [deps.Mooncake.extensions] MooncakeAllocCheckExt = "AllocCheck" @@ -2112,6 +2150,7 @@ version = "0.4.182" MooncakeFluxExt = "Flux" MooncakeFunctionWrappersExt = "FunctionWrappers" MooncakeJETExt = "JET" + MooncakeLogExpFunctionsExt = "LogExpFunctions" MooncakeLuxLibExt = ["LuxLib", "MLDataDevices", "Static"] MooncakeLuxLibSLEEFPiratesExtension = ["LuxLib", "SLEEFPirates"] MooncakeNNlibExt = ["NNlib", "GPUArraysCore"] @@ -2125,6 +2164,7 @@ version = "0.4.182" FunctionWrappers = "069b7b12-0de2-55c6-9aab-29f3d0a68a2e" GPUArraysCore = "46192b85-c4d5-4398-a991-12ede77f4527" JET = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b" + LogExpFunctions = "2ab3a3ac-af41-5b50-aa03-7779005ae688" LuxLib = "82251201-b29d-42c6-8e01-566dec8acb11" MLDataDevices = "7e8f7934-dd98-4c1a-8fe8-92b47a384d40" NNlib = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" @@ -2179,9 +2219,9 @@ version = "2.10.0+0" [[deps.NNlib]] deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Random", "ScopedValues", "Statistics"] -git-tree-sha1 = "eb6eb10b675236cee09a81da369f94f16d77dc2f" +git-tree-sha1 = "6dc9ffc3a9931e6b988f913b49630d0fb986d0a8" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.9.31" +version = "0.9.33" [deps.NNlib.extensions] NNlibAMDGPUExt = "AMDGPU" @@ -2190,6 +2230,7 @@ version = "0.9.31" NNlibEnzymeCoreExt = "EnzymeCore" NNlibFFTWExt = "FFTW" NNlibForwardDiffExt = "ForwardDiff" + NNlibMetalExt = "Metal" NNlibSpecialFunctionsExt = "SpecialFunctions" [deps.NNlib.weakdeps] @@ -2198,6 +2239,7 @@ version = "0.9.31" EnzymeCore = "f151be2c-9106-41f4-ab19-57ee4f262869" FFTW = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" + Metal = "dde4c033-4e86-420c-a63e-0dd931031962" SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b" cuDNN = "02a925ec-e4fe-4b08-9a7e-0d78e3d38ccd" @@ -2225,20 +2267,20 @@ uuid = "c020b1a1-e9b0-503a-9c33-f039bfc54a85" version = "1.0.0" [[deps.NearestNeighbors]] -deps = ["Distances", "StaticArrays"] -git-tree-sha1 = "e45bb6034fdef63d0c49b82ba9b889215bf8b344" +deps = ["AbstractTrees", "Distances", "StaticArrays"] +git-tree-sha1 = "2949f294f82b5ad7192fd544a988a1e785438ee2" uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce" -version = "0.4.24" +version = "0.4.26" [[deps.NetworkOptions]] uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ADTypes", "ArrayInterface", "BracketingNonlinearSolve", "CommonSolve", "ConcreteStructs", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "LinearSolve", "NonlinearSolveBase", "NonlinearSolveFirstOrder", "NonlinearSolveQuasiNewton", "NonlinearSolveSpectralMethods", "PrecompileTools", "Preferences", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "StaticArraysCore", "SymbolicIndexingInterface"] -git-tree-sha1 = "1d091cfece012662b06d25c792b3a43a0804c47b" +deps = ["ADTypes", "ArrayInterface", "BracketingNonlinearSolve", "CommonSolve", "ConcreteStructs", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "LinearSolve", "NonlinearSolveBase", "NonlinearSolveFirstOrder", "NonlinearSolveQuasiNewton", "NonlinearSolveSpectralMethods", "PrecompileTools", "Preferences", "Reexport", "SciMLBase", "SciMLLogging", "SimpleNonlinearSolve", "StaticArraysCore", "SymbolicIndexingInterface"] +git-tree-sha1 = "5db62e7c18af752a7a5260ed7576e7429ca87be4" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "4.12.0" +version = "4.14.0" [deps.NonlinearSolve.extensions] NonlinearSolveFastLevenbergMarquardtExt = "FastLevenbergMarquardt" @@ -2269,9 +2311,9 @@ version = "4.12.0" [[deps.NonlinearSolveBase]] deps = ["ADTypes", "Adapt", "ArrayInterface", "CommonSolve", "Compat", "ConcreteStructs", "DifferentiationInterface", "EnzymeCore", "FastClosures", "LinearAlgebra", "Markdown", "MaybeInplace", "Preferences", "Printf", "RecursiveArrayTools", "SciMLBase", "SciMLJacobianOperators", "SciMLLogging", "SciMLOperators", "SciMLStructures", "Setfield", "StaticArraysCore", "SymbolicIndexingInterface", "TimerOutputs"] -git-tree-sha1 = "3f963293e13d5eff19214b068f0cc0a28da8ea27" +git-tree-sha1 = "3e17fdeea0b444b233e9c8265c3bc4f43a0a2e03" uuid = "be0214bd-f91f-a760-ac4e-3421ce2b2da0" -version = "2.5.0" +version = "2.11.0" weakdeps = ["BandedMatrices", "ChainRulesCore", "Enzyme", "ForwardDiff", "LineSearch", "LinearSolve", "Mooncake", "ReverseDiff", "SparseArrays", "SparseMatrixColorings", "Tracker"] [deps.NonlinearSolveBase.extensions] @@ -2289,15 +2331,15 @@ weakdeps = ["BandedMatrices", "ChainRulesCore", "Enzyme", "ForwardDiff", "LineSe [[deps.NonlinearSolveFirstOrder]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConcreteStructs", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "LinearSolve", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "SciMLJacobianOperators", "Setfield", "StaticArraysCore"] -git-tree-sha1 = "872c32bc8a524e1a51bfc0a0cf72ff2a2f886226" +git-tree-sha1 = "bd6bb56e107fe9bea276982a03b8ed13332583b4" uuid = "5959db7a-ea39-4486-b5fe-2dd0bf03d60d" -version = "1.10.0" +version = "1.11.0" [[deps.NonlinearSolveQuasiNewton]] deps = ["ArrayInterface", "CommonSolve", "ConcreteStructs", "LinearAlgebra", "LinearSolve", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "SciMLOperators", "StaticArraysCore"] -git-tree-sha1 = "21596ddee2e18c95bfe92803988611ab6daa9cfe" +git-tree-sha1 = "ade27e8e9566b6cec63ee62f6a6650a11cf9a2eb" uuid = "9a2c21bd-3a47-402d-9113-8faf9a0ee114" -version = "1.11.0" +version = "1.12.0" weakdeps = ["ForwardDiff"] [deps.NonlinearSolveQuasiNewton.extensions] @@ -2341,9 +2383,9 @@ version = "1.3.6+0" [[deps.OpenBLAS32_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl"] -git-tree-sha1 = "ece4587683695fe4c5f20e990da0ed7e83c351e7" +git-tree-sha1 = "46cce8b42186882811da4ce1f4c7208b02deb716" uuid = "656ef2d0-ae68-5445-9ca0-591084a874a2" -version = "0.3.29+0" +version = "0.3.30+0" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] @@ -2387,9 +2429,9 @@ version = "1.13.3" [[deps.Optimisers]] deps = ["ChainRulesCore", "ConstructionBase", "Functors", "LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "131dc319e7c58317e8c6d5170440f6bdaee0a959" +git-tree-sha1 = "36b5d2b9dd06290cd65fcf5bdbc3a551ed133af5" uuid = "3bd65402-5787-11e9-1adc-39752487f4e2" -version = "0.4.6" +version = "0.4.7" [deps.Optimisers.extensions] OptimisersAdaptExt = ["Adapt"] @@ -2403,15 +2445,15 @@ version = "0.4.6" [[deps.Optimization]] deps = ["ADTypes", "ArrayInterface", "ConsoleProgressMonitor", "DocStringExtensions", "LinearAlgebra", "Logging", "LoggingExtras", "OptimizationBase", "Printf", "Reexport", "SciMLBase", "SparseArrays", "TerminalLoggers"] -git-tree-sha1 = "9c8a9bc453fa1b5a5913ffa77d4b9b8b586f1de8" +git-tree-sha1 = "166ff0e9c44c45f26113fef6971b8783d7ce7998" uuid = "7f7a1694-90dd-40f0-9382-eb1efda571ba" -version = "5.2.0" +version = "5.4.0" [[deps.OptimizationBase]] -deps = ["ADTypes", "ArrayInterface", "DifferentiationInterface", "DocStringExtensions", "FastClosures", "LinearAlgebra", "PDMats", "Reexport", "SciMLBase", "SparseArrays", "SparseConnectivityTracer", "SparseMatrixColorings"] -git-tree-sha1 = "96e15dffd0499eba632c10a4d864b98071042809" +deps = ["ADTypes", "ArrayInterface", "DifferentiationInterface", "DocStringExtensions", "FastClosures", "LinearAlgebra", "PDMats", "PrecompileTools", "Reexport", "SciMLBase", "SparseArrays", "SparseConnectivityTracer", "SparseMatrixColorings"] +git-tree-sha1 = "9d1129ecde9f1773521196bdb2c5f16170bb2f6c" uuid = "bca83a33-5cc9-4baa-983d-23429ab6bcbb" -version = "4.0.2" +version = "4.2.0" [deps.OptimizationBase.extensions] OptimizationEnzymeExt = "Enzyme" @@ -2419,7 +2461,6 @@ version = "4.0.2" OptimizationForwardDiffExt = "ForwardDiff" OptimizationMLDataDevicesExt = "MLDataDevices" OptimizationMLUtilsExt = "MLUtils" - OptimizationMTKExt = "ModelingToolkit" OptimizationReverseDiffExt = "ReverseDiff" OptimizationSymbolicAnalysisExt = "SymbolicAnalysis" OptimizationZygoteExt = "Zygote" @@ -2430,7 +2471,6 @@ version = "4.0.2" ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" MLDataDevices = "7e8f7934-dd98-4c1a-8fe8-92b47a384d40" MLUtils = "f1d291b0-491e-4a28-83b9-f70985020b54" - ModelingToolkit = "961ee093-0014-501f-94e3-6117800e7a78" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" SymbolicAnalysis = "4297ee4d-0239-47d8-ba5d-195ecdf594fe" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" @@ -2449,9 +2489,9 @@ version = "0.4.8" [[deps.Opus_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c392fc5dd032381919e3b22dd32d6443760ce7ea" +git-tree-sha1 = "39a11854f0cba27aa41efaedf43c77c5daa6be51" uuid = "91d4177d-7536-5919-b921-800302f37372" -version = "1.5.2+0" +version = "1.6.0+0" [[deps.OrderedCollections]] git-tree-sha1 = "05868e21324cede2207c6f0f466b4bfef6d5e7ee" @@ -2459,28 +2499,28 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.8.1" [[deps.OrdinaryDiffEq]] -deps = ["ADTypes", "Adapt", "ArrayInterface", "CommonSolve", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FillArrays", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "MacroTools", "MuladdMacro", "NonlinearSolve", "OrdinaryDiffEqAdamsBashforthMoulton", "OrdinaryDiffEqBDF", "OrdinaryDiffEqCore", "OrdinaryDiffEqDefault", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqExplicitRK", "OrdinaryDiffEqExponentialRK", "OrdinaryDiffEqExtrapolation", "OrdinaryDiffEqFIRK", "OrdinaryDiffEqFeagin", "OrdinaryDiffEqFunctionMap", "OrdinaryDiffEqHighOrderRK", "OrdinaryDiffEqIMEXMultistep", "OrdinaryDiffEqLinear", "OrdinaryDiffEqLowOrderRK", "OrdinaryDiffEqLowStorageRK", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqNordsieck", "OrdinaryDiffEqPDIRK", "OrdinaryDiffEqPRK", "OrdinaryDiffEqQPRK", "OrdinaryDiffEqRKN", "OrdinaryDiffEqRosenbrock", "OrdinaryDiffEqSDIRK", "OrdinaryDiffEqSSPRK", "OrdinaryDiffEqStabilizedIRK", "OrdinaryDiffEqStabilizedRK", "OrdinaryDiffEqSymplecticRK", "OrdinaryDiffEqTsit5", "OrdinaryDiffEqVerner", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "Static", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "89172157d16139165d470602f1e552484b357771" +deps = ["ADTypes", "Adapt", "ArrayInterface", "CommonSolve", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FillArrays", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "MacroTools", "MuladdMacro", "NonlinearSolve", "OrdinaryDiffEqAdamsBashforthMoulton", "OrdinaryDiffEqBDF", "OrdinaryDiffEqCore", "OrdinaryDiffEqDefault", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqExplicitRK", "OrdinaryDiffEqExponentialRK", "OrdinaryDiffEqExtrapolation", "OrdinaryDiffEqFIRK", "OrdinaryDiffEqFeagin", "OrdinaryDiffEqFunctionMap", "OrdinaryDiffEqHighOrderRK", "OrdinaryDiffEqIMEXMultistep", "OrdinaryDiffEqLinear", "OrdinaryDiffEqLowOrderRK", "OrdinaryDiffEqLowStorageRK", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqNordsieck", "OrdinaryDiffEqPDIRK", "OrdinaryDiffEqPRK", "OrdinaryDiffEqQPRK", "OrdinaryDiffEqRKN", "OrdinaryDiffEqRosenbrock", "OrdinaryDiffEqSDIRK", "OrdinaryDiffEqSSPRK", "OrdinaryDiffEqStabilizedIRK", "OrdinaryDiffEqStabilizedRK", "OrdinaryDiffEqSymplecticRK", "OrdinaryDiffEqTsit5", "OrdinaryDiffEqVerner", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleNonlinearSolve", "SparseArrays", "Static", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] +git-tree-sha1 = "00c0f2ce8fba6b7edd8847875043a28c1e6ec6cb" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.103.0" +version = "6.105.0" [[deps.OrdinaryDiffEqAdamsBashforthMoulton]] deps = ["DiffEqBase", "FastBroadcast", "MuladdMacro", "OrdinaryDiffEqCore", 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"JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "TOML", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "7b990898534ea9797bf9bf21bd086850e5d9f817" +git-tree-sha1 = "063ef757a1e0e15af77bbe92be92da672793fd4e" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.41.2" +version = "1.41.4" [deps.Plots.extensions] FileIOExt = "FileIO" @@ -2779,9 +2819,9 @@ version = "1.2.1" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "0f27480397253da18fe2c12a4ba4eb9eb208bf3d" +git-tree-sha1 = "522f093a29b31a93e34eaea17ba055d850edea28" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.5.0" +version = "1.5.1" [[deps.PrettyPrint]] git-tree-sha1 = "632eb4abab3449ab30c5e1afaa874f0b98b586e4" @@ -2794,6 +2834,12 @@ git-tree-sha1 = "c5a07210bd060d6a8491b0ccdee2fa0235fc00bf" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" version = "3.1.2" +[[deps.Primes]] +deps = ["IntegerMathUtils"] +git-tree-sha1 = "25cdd1d20cd005b52fc12cb6be3f75faaf59bb9b" +uuid = "27ebfcd6-29c5-5fa9-bf4b-fb8fc14df3ae" +version = "0.5.7" + [[deps.Printf]] deps = ["Unicode"] uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" @@ -2851,16 +2897,16 @@ weakdeps = ["Enzyme"] QuadGKEnzymeExt = "Enzyme" [[deps.RData]] -deps = ["CategoricalArrays", "CodecZlib", "DataFrames", "Dates", "FileIO", "Requires", "TimeZones", "Unicode"] -git-tree-sha1 = "19e47a495dfb7240eb44dc6971d660f7e4244a72" +deps = ["CategoricalArrays", "CodecZlib", "DataAPI", "DataFrames", "Dates", "FileIO", "Requires", "TimeZones", "Unicode"] +git-tree-sha1 = "7d71a86313a7e2c6e4e21836c51c846a061e3735" uuid = "df47a6cb-8c03-5eed-afd8-b6050d6c41da" -version = "0.8.3" +version = "1.1.0" [[deps.RDatasets]] deps = ["CSV", "CodecZlib", "DataFrames", "FileIO", "Printf", "RData", "Reexport"] -git-tree-sha1 = "2720e6f6afb3e562ccb70a6b62f8f308ff810333" +git-tree-sha1 = "959a35b071feb3cb08760c7b0ad5d63e56e2b1ff" uuid = "ce6b1742-4840-55fa-b093-852dadbb1d8b" -version = "0.7.7" +version = "0.8.1" [[deps.REPL]] deps = ["InteractiveUtils", "Markdown", "Sockets", "StyledStrings", "Unicode"] @@ -2899,6 +2945,12 @@ weakdeps = ["FixedPointNumbers"] [deps.Ratios.extensions] RatiosFixedPointNumbersExt = "FixedPointNumbers" +[[deps.ReactantCore]] +deps = ["ExpressionExplorer", "MacroTools"] +git-tree-sha1 = "f3e31b90afcd152578a6c389eae46dd38b9a4f38" +uuid = "a3311ec8-5e00-46d5-b541-4f83e724a433" +version = "0.1.16" + [[deps.RealDot]] deps = ["LinearAlgebra"] git-tree-sha1 = "9f0a1b71baaf7650f4fa8a1d168c7fb6ee41f0c9" @@ -2918,10 +2970,10 @@ uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" version = "0.6.12" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"] -git-tree-sha1 = "51bdb23afaaa551f923a0e990f7c44a4451a26f1" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "LinearAlgebra", "PrecompileTools", "RecipesBase", "StaticArraysCore", "SymbolicIndexingInterface"] +git-tree-sha1 = "d8fbab1e8a272cc8e73fc24515075e48e6f77034" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.39.0" +version = "3.45.1" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" @@ -2931,6 +2983,7 @@ version = "3.39.0" RecursiveArrayToolsMonteCarloMeasurementsExt = "MonteCarloMeasurements" RecursiveArrayToolsReverseDiffExt = ["ReverseDiff", "Zygote"] RecursiveArrayToolsSparseArraysExt = ["SparseArrays"] + RecursiveArrayToolsStatisticsExt = "Statistics" RecursiveArrayToolsStructArraysExt = "StructArrays" RecursiveArrayToolsTablesExt = ["Tables"] RecursiveArrayToolsTrackerExt = "Tracker" @@ -2944,6 +2997,7 @@ version = "3.39.0" MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" + Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" StructArrays = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" Tables = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" @@ -2968,15 +3022,15 @@ version = "1.3.1" [[deps.ResettableStacks]] deps = ["StaticArrays"] -git-tree-sha1 = "256eeeec186fa7f26f2801732774ccf277f05db9" +git-tree-sha1 = "31c086583c92ab32d82ebef0d09fbcd6dd2c54a7" uuid = "ae5879a3-cd67-5da8-be7f-38c6eb64a37b" -version = "1.1.1" +version = "1.2.0" [[deps.ReverseDiff]] deps = ["ChainRulesCore", "DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] -git-tree-sha1 = "3ab8eee3620451b09f0272c271875b4bc02146d9" +git-tree-sha1 = "f1b07322a8cdc0d46812473b37fb72f69ec07b22" uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" -version = "1.16.1" +version = "1.16.2" [[deps.Rmath]] deps = ["Random", "Rmath_jll"] @@ -3029,15 +3083,15 @@ version = "0.1.0" [[deps.SSMProblems]] deps = ["AbstractMCMC", "Distributions", "Random"] -git-tree-sha1 = "5dd0431563784b468db06335ce8777653092d621" +git-tree-sha1 = "cbf723e4c486375cf91236db53a7beefe8291951" uuid = "26aad666-b158-4e64-9d35-0e672562fa48" -version = "0.5.2" +version = "0.6.1" [[deps.SciMLBase]] deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Moshi", "PreallocationTools", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLLogging", "SciMLOperators", "SciMLPublic", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"] -git-tree-sha1 = "b06382e2f1ff0c9aff4f88f560673c800df6099f" +git-tree-sha1 = "9923adc7defeba6a52a99eb493ec317ac6c65942" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.128.0" +version = "2.134.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -3080,21 +3134,21 @@ version = "2.128.0" [[deps.SciMLJacobianOperators]] deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "ConstructionBase", "DifferentiationInterface", "FastClosures", "LinearAlgebra", "SciMLBase", "SciMLOperators"] -git-tree-sha1 = "a273b291c90909ba6fe08402dd68e09aae423008" +git-tree-sha1 = "e96d5e96debf7f80a50d0b976a13dea556ccfd3a" uuid = "19f34311-ddf3-4b8b-af20-060888a46c0e" -version = "0.1.11" +version = "0.1.12" [[deps.SciMLLogging]] deps = ["Logging", "LoggingExtras", "Preferences"] -git-tree-sha1 = "1713f77f37f6809cd5b051197ea9adf139101ae5" +git-tree-sha1 = "7eebb9985e35b123e12025a3a2ad020cd6059f71" uuid = "a6db7da4-7206-11f0-1eab-35f2a5dbe1d1" -version = "1.6.0" +version = "1.8.0" [[deps.SciMLOperators]] deps = ["Accessors", "ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools"] -git-tree-sha1 = "9deb07bb4e6f95712bda5617a717caed701fbe4b" +git-tree-sha1 = "d1d14b15bbebf48dc80e8a7cfe640e2d835e22ea" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "1.14.0" +version = "1.14.1" weakdeps = ["SparseArrays", "StaticArraysCore"] [deps.SciMLOperators.extensions] @@ -3102,25 +3156,25 @@ weakdeps = ["SparseArrays", "StaticArraysCore"] SciMLOperatorsStaticArraysCoreExt = "StaticArraysCore" [[deps.SciMLPublic]] -git-tree-sha1 = "ed647f161e8b3f2973f24979ec074e8d084f1bee" +git-tree-sha1 = "0ba076dbdce87ba230fff48ca9bca62e1f345c9b" uuid = "431bcebd-1456-4ced-9d72-93c2757fff0b" -version = "1.0.0" +version = "1.0.1" [[deps.SciMLSensitivity]] -deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "ChainRulesCore", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "Distributions", "Enzyme", "FastBroadcast", "FiniteDiff", "ForwardDiff", "FunctionProperties", "FunctionWrappersWrappers", "Functors", "GPUArraysCore", "LinearAlgebra", "LinearSolve", "Markdown", "OrdinaryDiffEqCore", "PreallocationTools", "QuadGK", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "ReverseDiff", "SciMLBase", "SciMLJacobianOperators", "SciMLStructures", "StaticArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tracker", "Zygote"] -git-tree-sha1 = "3daf56b14764a18b47ccd0b3560dc583a180727f" +deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "ChainRulesCore", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "Distributions", "Enzyme", "FastBroadcast", "FiniteDiff", "ForwardDiff", "FunctionProperties", "FunctionWrappersWrappers", "Functors", "GPUArraysCore", "LinearAlgebra", "LinearSolve", "Markdown", "OrdinaryDiffEqCore", "PreallocationTools", "QuadGK", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "ReverseDiff", "SciMLBase", "SciMLJacobianOperators", "SciMLLogging", "SciMLStructures", "StaticArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tracker", "Zygote"] +git-tree-sha1 = "b099878e89bb8175aaba5d16aba703564b5bb2ed" uuid = "1ed8b502-d754-442c-8d5d-10ac956f44a1" -version = "7.90.0" +version = "7.94.0" weakdeps = ["Mooncake"] [deps.SciMLSensitivity.extensions] SciMLSensitivityMooncakeExt = "Mooncake" [[deps.SciMLStructures]] -deps = ["ArrayInterface"] -git-tree-sha1 = "566c4ed301ccb2a44cbd5a27da5f885e0ed1d5df" +deps = ["ArrayInterface", "PrecompileTools"] +git-tree-sha1 = "607f6867d0b0553e98fc7f725c9f9f13b4d01a32" uuid = "53ae85a6-f571-4167-b2af-e1d143709226" -version = "1.7.0" +version = "1.10.0" [[deps.ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -3141,9 +3195,9 @@ version = "1.3.0" [[deps.SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "712fb0231ee6f9120e005ccd56297abbc053e7e0" +git-tree-sha1 = "ebe7e59b37c400f694f52b58c93d26201387da70" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.4.8" +version = "1.4.9" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -3183,9 +3237,9 @@ version = "1.2.0" [[deps.SimpleNonlinearSolve]] deps = ["ADTypes", "ArrayInterface", "BracketingNonlinearSolve", "CommonSolve", "ConcreteStructs", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LineSearch", "LinearAlgebra", "MaybeInplace", "NonlinearSolveBase", "PrecompileTools", "Reexport", "SciMLBase", "Setfield", "StaticArraysCore"] -git-tree-sha1 = "8825064775bf4ae0f22d04ea63979d8c868fd510" +git-tree-sha1 = "315da09948861edbc6d18e066c08903487bb580d" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "2.9.0" +version = "2.10.0" weakdeps = ["ChainRulesCore", "ReverseDiff", "Tracker"] [deps.SimpleNonlinearSolve.extensions] @@ -3199,11 +3253,6 @@ git-tree-sha1 = "be8eeac05ec97d379347584fa9fe2f5f76795bcb" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.5" -[[deps.SimpleUnPack]] -git-tree-sha1 = "58e6353e72cde29b90a69527e56df1b5c3d8c437" -uuid = "ce78b400-467f-4804-87d8-8f486da07d0a" -version = "1.1.0" - [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" version = "1.11.0" @@ -3299,9 +3348,9 @@ weakdeps = ["OffsetArrays", "StaticArrays"] [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "b8693004b385c842357406e3af647701fe783f98" +git-tree-sha1 = "eee1b9ad8b29ef0d936e3ec9838c7ec089620308" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.9.15" +version = "1.9.16" weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] @@ -3354,9 +3403,9 @@ weakdeps = ["ChainRulesCore", "InverseFunctions"] [[deps.StatsModels]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Printf", "REPL", "ShiftedArrays", "SparseArrays", "StatsAPI", "StatsBase", "StatsFuns", "Tables"] -git-tree-sha1 = "b117c1fe033a04126780c898e75c7980bf676df3" +git-tree-sha1 = "b12d37d25a2378f01abba02591cfd39a6cc4936f" uuid = "3eaba693-59b7-5ba5-a881-562e759f1c8d" -version = "0.7.7" +version = "0.7.8" [[deps.StatsPlots]] deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] @@ -3366,15 +3415,15 @@ version = "0.15.8" [[deps.SteadyStateDiffEq]] deps = ["ConcreteStructs", "DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "NonlinearSolveBase", "Reexport", "SciMLBase"] -git-tree-sha1 = "10947da4f1b823ed43890bddda7e8d19dde89e2e" +git-tree-sha1 = "7b32737ebda77355ee61cfa9e59d376de3604629" uuid = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f" -version = "2.8.0" +version = "2.9.0" [[deps.StochasticDiffEq]] -deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FastPower", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "Random", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "StaticArrays", "UnPack"] -git-tree-sha1 = "a4f362cce06506d1be3a6cdd50b4828c8a0d3a7b" +deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FastPower", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "OrdinaryDiffEqCore", "OrdinaryDiffEqDifferentiation", "OrdinaryDiffEqNonlinearSolve", "Random", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "StaticArrays"] +git-tree-sha1 = "d24537c04013ab0f6fa17c17f06594bac9ad61f2" uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0" -version = "6.85.0" +version = "6.90.0" [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] @@ -3390,9 +3439,9 @@ version = "2.3.2" [[deps.StridedViews]] deps = ["LinearAlgebra", "PackageExtensionCompat"] -git-tree-sha1 = "425158c52aa58d42593be6861befadf8b2541e9b" +git-tree-sha1 = "e34a59ea9c7abc8f10bfd77578de9d64bded2859" uuid = "4db3bf67-4bd7-4b4e-b153-31dc3fb37143" -version = "0.4.1" +version = "0.4.3" [deps.StridedViews.extensions] StridedViewsCUDAExt = "CUDA" @@ -3429,9 +3478,9 @@ version = "0.3.1" [[deps.StructUtils]] deps = ["Dates", "UUIDs"] -git-tree-sha1 = "79529b493a44927dd5b13dde1c7ce957c2d049e4" +git-tree-sha1 = "9297459be9e338e546f5c4bedb59b3b5674da7f1" uuid = "ec057cc2-7a8d-4b58-b3b3-92acb9f63b42" -version = "2.6.0" +version = "2.6.2" [deps.StructUtils.extensions] StructUtilsMeasurementsExt = ["Measurements"] @@ -3451,9 +3500,9 @@ uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" [[deps.SuiteSparse32_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "libblastrampoline_jll"] -git-tree-sha1 = "dc199915b7d2d1a25c8b66968e905f9cc671c1be" +git-tree-sha1 = "1d43a4874b879f381b8a3a978f0ebe837cfd0922" uuid = "ca45d3f4-326b-53b0-9957-23b75aacb3f2" -version = "7.11.0+0" +version = "7.12.1+0" [[deps.SuiteSparse_jll]] deps = ["Artifacts", "Libdl", "libblastrampoline_jll"] @@ -3635,9 +3684,9 @@ version = "1.6.0" [[deps.Turing]] deps = ["ADTypes", "AbstractMCMC", "AbstractPPL", "Accessors", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "Compat", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "MCMCChains", "NamedArrays", "Optimization", "OptimizationOptimJL", "OrderedCollections", "Printf", "Random", "Reexport", "SciMLBase", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "69b42b532b4a92c6093e46be2b1a9d62a155489d" +git-tree-sha1 = "60cf1c55af3215fcca2b1d6cd2e09f5ea63056a5" uuid = "fce5fe82-541a-59a6-adf8-730c64b5f9a0" -version = "0.42.0" +version = "0.42.4" weakdeps = ["DynamicHMC"] [deps.Turing.extensions] @@ -3653,11 +3702,6 @@ deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" version = "1.11.0" -[[deps.UnPack]] -git-tree-sha1 = "387c1f73762231e86e0c9c5443ce3b4a0a9a0c2b" -uuid = "3a884ed6-31ef-47d7-9d2a-63182c4928ed" -version = "1.0.2" - [[deps.Unicode]] uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" version = "1.11.0" @@ -3701,17 +3745,17 @@ uuid = "ea10d353-3f73-51f8-a26c-33c1cb351aa5" version = "1.4.2" [[deps.WeightInitializers]] -deps = ["ArgCheck", "ConcreteStructs", "GPUArraysCore", "LinearAlgebra", "Random", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "0dd06916d60d6cc7d1a7b2d3c895b5a261353cf9" +deps = ["ConcreteStructs", "GPUArraysCore", "LinearAlgebra", "Random", "SpecialFunctions", "Statistics"] +git-tree-sha1 = "d79b71da9e7be904db615bdb99187d30753822a4" uuid = "d49dbf32-c5c2-4618-8acc-27bb2598ef2d" -version = "1.2.2" +version = "1.3.1" [deps.WeightInitializers.extensions] - WeightInitializersAMDGPUExt = "AMDGPU" - WeightInitializersCUDAExt = "CUDA" - WeightInitializersChainRulesCoreExt = "ChainRulesCore" - WeightInitializersGPUArraysExt = "GPUArrays" - WeightInitializersReactantExt = "Reactant" + AMDGPUExt = "AMDGPU" + CUDAExt = "CUDA" + ChainRulesCoreExt = "ChainRulesCore" + GPUArraysExt = "GPUArrays" + ReactantExt = "Reactant" [deps.WeightInitializers.weakdeps] AMDGPU = "21141c5a-9bdb-4563-92ae-f87d6854732e" @@ -3728,9 +3772,9 @@ version = "0.6.7" [[deps.WoodburyMatrices]] deps = ["LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c1a7aa6219628fcd757dede0ca95e245c5cd9511" +git-tree-sha1 = "248a7031b3da79a127f14e5dc5f417e26f9f6db7" uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6" -version = "1.0.0" +version = "1.1.0" [[deps.WorkerUtilities]] git-tree-sha1 = "cd1659ba0d57b71a464a29e64dbc67cfe83d54e7" @@ -3739,9 +3783,9 @@ version = "1.6.1" [[deps.XZ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "fee71455b0aaa3440dfdd54a9a36ccef829be7d4" +git-tree-sha1 = "9cce64c0fdd1960b597ba7ecda2950b5ed957438" uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800" -version = "5.8.1+0" +version = "5.8.2+0" [[deps.Xorg_libICE_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -3971,9 +4015,9 @@ version = "1.28.1+0" [[deps.libpng_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] -git-tree-sha1 = "5cb3c5d039f880c0b3075803c8bf45cb95ae1e91" +git-tree-sha1 = "6ab498eaf50e0495f89e7a5b582816e2efb95f64" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" -version = "1.6.51+0" +version = "1.6.54+0" [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll"]